The Office of Pastoral Coordinator is a resource for parishes, schools and other Diocesan entities as they undertake planning in support of the mission of the Church in Masaka. The Office of Pastoral Coordinator plans, conducts research, collects and analyzes data, and provides training, guidance and tools for mission-oriented activities.

Five commissions were established by the second Diocesan Synod in 1981 to facilitate the work of propagating the faith and the promotion of the related pastoral activities in the Diocese. The Diocesan Synod III of 1986 and the Diocesan Synod IV of 1993 re-affirmed the importance of these commissions. They are The Pastoral, Education, Finance, Social Development and Laity Commission.